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danielLuo2/bioharbor

[](https://glama.ai/mcp/servers/danielLuo2/bioharbor) 🐍 🏠 🍎 🪟 🐧 - Run MMseqs2 homology search, ESMFold structure prediction and sequence tools on your own GPUs, with GPU-aware

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Our verdict

Not reviewed yet

We have not reviewed danielLuo2/bioharbor yet

No one at Enterprise DNA has checked this listing against its sources. The description comes from public listings gathered automatically. Any fact below shows where it came from and when it was last checked.

How we review records

From the listing

About danielLuo2/bioharbor

bioharbor is a Python-based tool that runs bioinformatics workloads, including MMseqs2 homology search, ESMFold structure prediction, and sequence analysis, on local GPUs. It is GPU-aware and supports multiple operating systems (Linux, macOS, Windows).

Best for

Bioinformatics developers who need GPU-accelerated sequence analysis on their own hardware.

Use cases

  • Run MMseqs2 homology searches on local GPU hardware
  • Predict protein structures with ESMFold without cloud dependencies
  • Execute sequence analysis tools in a self-hosted environment

Notes

0 stars on GitHub. Last updated 2026-10-10. Licensed Apache-2.0.

Pros

  • Leverages local GPUs for faster bioinformatics processing
  • Cross-platform support (Linux, macOS, Windows)
  • Combines multiple bioinformatics tools in one package

Cons

  • Requires local GPU resources, which may not be available to all users
  • No documentation or usage examples provided in the listing
  • Project appears to have no community traction (zero stars)

Key facts

What we have checked

Not checked yet. Dated facts such as prices, releases and repository activity appear here once we have confirmed them from a source.

Install

Add danielLuo2/bioharbor to your client

Not verified yet

Our lab has not run this server yet. "Config checked" on a client means the recipe matches that client's documented config format; it does not mean we ran it.

Claude Code

Config checked

Run in your terminal (runs on your computer)

claude mcp add --transport stdio danielluo2-bioharbor -- uvx bioharbor@0.1.6 serve

Version 0.1.6 · From the Official MCP registry, read · Format checked against Claude Code's config docs

Claude Desktop

Config checked

Add to claude_desktop_config.json (runs on your computer)

{
  "mcpServers": {
    "danielluo2-bioharbor": {
      "command": "uvx",
      "args": [
        "bioharbor@0.1.6",
        "serve"
      ]
    }
  }
}

Version 0.1.6 · From the Official MCP registry, read · Format checked against Claude Desktop's config docs

Cursor

Config checked

Add to .cursor/mcp.json (runs on your computer)

{
  "mcpServers": {
    "danielluo2-bioharbor": {
      "command": "uvx",
      "args": [
        "bioharbor@0.1.6",
        "serve"
      ]
    }
  }
}

Version 0.1.6 · From the Official MCP registry, read · Format checked against Cursor's config docs

VS Code

Config checked

Add to .vscode/mcp.json (runs on your computer)

{
  "servers": {
    "danielluo2-bioharbor": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "bioharbor@0.1.6",
        "serve"
      ]
    }
  }
}

Version 0.1.6 · From the Official MCP registry, read · Format checked against VS Code's config docs

Codex

Config checked

Add to ~/.codex/config.toml (runs on your computer)

[mcp_servers.danielluo2-bioharbor]
command = "uvx"
args = ["bioharbor@0.1.6", "serve"]

Version 0.1.6 · From the Official MCP registry, read · Format checked against Codex's config docs

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Recipes come from the server's entry in the official MCP registry. Check the package name before you run it, and keep keys out of shared files.

Works with

What danielLuo2/bioharbor connects to

5 clients, each with how we know and when we checked.

Works withTypeHow we knowChecked
Claude CodeClientInstall recipe matches the client's documented formatRuns locally, version 0.1.6Config checkedClaude Code docs
Claude DesktopClientInstall recipe matches the client's documented formatRuns locally, version 0.1.6Config checkedClaude Desktop docs
CursorClientInstall recipe matches the client's documented formatRuns locally, version 0.1.6Config checkedCursor docs
VS CodeClientInstall recipe matches the client's documented formatRuns locally, version 0.1.6Config checkedVS Code docs
CodexClientInstall recipe matches the client's documented formatRuns locally, version 0.1.6Config checkedCodex docs

Sources

Where this comes from

No sources recorded yet. Each source we check is listed here with the date we checked it.

A source shows what was published when we checked it. It does not certify security, performance or a working installation. Read our method.

Changelog

What changed

No changes recorded yet. Releases, price changes and deprecations appear here, with their dates, once we track them for this record.

Pairs with

Other entries in the index that connect to this one. Click through to see the chain.

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